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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912365.1_cds_XP_016462441.1_55671
CDS Infomation

[gene=LOC107785613] [db_xref=GeneID:107785613] [protein=ubiquitin carboxyl-terminal hydrolase 20-like] [protein_id=XP_016462441.1] [location=join(15401..15808,18059..18179,18337..18447,18982..19154,19574..19912,20036..20158,20342..20831,20983..21209)] [gbkey=CDS]
Sequence

ATGGAAACCCATCTCGTGGAAAGCCTAAAGATTCAACCTTTACCTGTTAATTCAGTTGAA
TTTCAAAAAACCTTAGATGGGTCATCCCCAAATTCGCCGAATCAAGCTCAGCAAAGTGAT
GAATTGGAAAAAGATGGTGACGTTTTGGCAGAAGAAGATTCCAGAAGAGTTGAGAATGAA
AATGAGGAGAATTTGGATTTGGATTCTAATTGGGCTGATTCTTGGGCCAAAGTTACTGAT
TCAAGCCCATTGGACTCGCAATGGTCTGTTGATACTGCTGATTATGGGCCTTCGTCTTCA
GAAATTAAGCCATTGGACTCAGTTGGGCCCGAATGGAATTTTCAAAGAGATGAGGAAACT
AAGCCTGAAATCTCTGATCTGCCCTTTGAGAATCAGACTTTTAAGCTGGGTGCTGGACTT
GCTAATTTAGGCAACACATGCTTTCTAAATGCGGTTTTGCAATCTTTCATTCACACAGTG
CCTTTGCTTCAGCTCCTTACGTCGAATGATCATACATCCCCATGTGATAGTTACCTTAGA
GGATTCTGCGTATTTTATGCTTTTAGGGAGCTTATTGATCTTTCATTGGCTTCTGGGGGT
GGTGTTGTCTCGCCGTGGAAACTTGTTAACAATTTAAACCATTTTTCATCCAGTTTTCAT
AGGTTCCAACAAGAAGACGCTCATGAATTCCTCCAATGTTTTCTGGATAGACTTGAAAGC
TGTTGTAATGATTCAGGGCCGAAAGACAGGGCAGCACCATCGGAAAGTGACAACATTGTG
AAGCAGGCCTTTGGTGGTCGCCTTGTCAGCAAACTACGCTGTTGCAATTGTGGTCACTGC
TCCGACACTTATGAGCCTCTAATTGATCTAAGTTTGGAGATCAAGGATGTTGACAGTTTA
CCCGAAGCTTTGGAGTCTTTCACAAAAATTGAGAAAATTGATGATCCAGAGATAAAGTTT
TCATGTGAAAAATGTAAGGAACAAGTGCCAATCGAGAAGCAGCTTGTGCTCGATAAGGCC
CCTTCTGTCGCTGCCTTCCATTTGAAGAGATTTGAAAATGATGGTTCTTTTGTTGAGAAG
GTTGACAAACATGTTTCATTTCCACTGGAATTGGACTTGCTTCCTTATACTGATAGCAAC
CAAATTGCTAATGAAGAAATGAAGTACGATCTTTATGCAGTTATAGTGCATAGCGGGTTT
TCATCCTGTTCAGGGCATTATTACAGCTTCATTCGTTCTGCACCAGATGAATGGTACAAA
TTTGATGACTCAGAGGTATTTCGGGTTCAAGAAGATCTTGTTTTGGAAGAGGAGGCATAT
ATTATGTTCTATGCAAAGAGAGGCACTCCGTGGTTTTCAGATTTTGTCGAAATGAAAAAG
CCCTTCATAGATCCGTCCATATTTAATACTTCTCCAAAGTCTGTTCTAGATAATGTGGAT
GCTATCTCCATAGCTTCTCCGCGCATGCCAAATAGTCTCACTTGCGATGTCAGTGAATCC
AATAATGCTGCAGATGAAGCATCTCCTAAACCTGATCTCGAAAAGATTGAGGATAGTGAA
TCGAAGGATACTGAGCAGACGTCTACTCCAGGACTAGCTGGTGCAAGGAAATCTCTGGAT
TCTCATGTAGATGAAGTGTTTTTACCTTCAATGCATGAAGAAAACTATACTCGAGAGGTT
GGTGTGACCAAAAGAAGTGCAACTCTTACTCCCAAGACACCGTCTAGATCTCCAAGTCCA
GAGATATACCGAGATGATCCCTCTGAAAACACTTACGCCATTCCTCGTGGCCATCTAGCA
TTAGCAGATCAGGTTTCTTGCAAGCATCAATCGCAGAAGGATCAAGAGCGGGACTTGGAA
AGAAAGCAGGCGTTTTCTCTGATTAAGAAACGAATTCCAGGGTCAAGAGGTCAACAATTA
ATGGCTGCCATGCGTGGCTCACGCAGTGAAGGTTCCGTGAACAAGAAAAGGAGAAAACTG
CAAGTAGTTTAG

Peptide Sequence

PEP ID

XP_016462441.1
PEP Infomation

PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Nicotiana tabacum]
Sequence

METHLVESLKIQPLPVNSVEFQKTLDGSSPNSPNQAQQSDELEKDGDVLAEEDSRRVENE
NEENLDLDSNWADSWAKVTDSSPLDSQWSVDTADYGPSSSEIKPLDSVGPEWNFQRDEET
KPEISDLPFENQTFKLGAGLANLGNTCFLNAVLQSFIHTVPLLQLLTSNDHTSPCDSYLR
GFCVFYAFRELIDLSLASGGGVVSPWKLVNNLNHFSSSFHRFQQEDAHEFLQCFLDRLES
CCNDSGPKDRAAPSESDNIVKQAFGGRLVSKLRCCNCGHCSDTYEPLIDLSLEIKDVDSL
PEALESFTKIEKIDDPEIKFSCEKCKEQVPIEKQLVLDKAPSVAAFHLKRFENDGSFVEK
VDKHVSFPLELDLLPYTDSNQIANEEMKYDLYAVIVHSGFSSCSGHYYSFIRSAPDEWYK
FDDSEVFRVQEDLVLEEEAYIMFYAKRGTPWFSDFVEMKKPFIDPSIFNTSPKSVLDNVD
AISIASPRMPNSLTCDVSESNNAADEASPKPDLEKIEDSESKDTEQTSTPGLAGARKSLD
SHVDEVFLPSMHEENYTREVGVTKRSATLTPKTPSRSPSPEIYRDDPSENTYAIPRGHLA
LADQVSCKHQSQKDQERDLERKQAFSLIKKRIPGSRGQQLMAAMRGSRSEGSVNKKRRKL
QVV

Transcript Sequence

Gene sequence data has not been registered.